The detailed information of tRNA gene sequence


Sequence ID>WENV170019903
Genome IDBBPE01001306
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 6624
End posion on genome 6549
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tcgaatcatg
tRNA gene sequence 
GTGAGTGTGGCCAAGTGGTTAAGGCGCCAGGTTGTGGCCCTGGAGATCGAGGGTTCGAAT
CCCTTCACTCACCCCA
Downstream region at tRNA end position 
tccaaatatc
Secondary structure (Cloverleaf model)
>WENV170019903	His	GTG
                   g      CCCA tccaaatatc
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       A C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     AGATC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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