The detailed information of tRNA gene sequence


Sequence ID>WENV170019917
Genome IDBBPE01001419
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2023
End posion on genome 2115
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caaaagcgct
tRNA gene sequence 
GGAGTGATGACCGAGAGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGCGGTGTAGAGCC
GCATCGAGGGTTCGAATCCCTCTCACTCCGCCA
Downstream region at tRNA end position 
ccattttggc
Secondary structure (Cloverleaf model)
>WENV170019917	Ser	GCT
                   t      GCCA ccattttggc
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGCGGTGTAGAGCCGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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