The detailed information of tRNA gene sequence


Sequence ID>WENV170019953
Genome IDBBPE01001778
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 875
End posion on genome 964
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gggcgccgcg
tRNA gene sequence 
GGGCAGGTGGCCGAGCGGTCTATGGCACCGGTCTTGAAAACCGGCGTGGGTTCGCGCCCA
CCGTGGGTTCGAATCCCACCCTGCCCGCCA
Downstream region at tRNA end position 
gccttttccg
Secondary structure (Cloverleaf model)
>WENV170019953	Ser	TGA
                   g      GCCA gccttttccg
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G       + | | |                 T T
    T       T G G C
      C T A        A     CGTGGGTTCGCGCCCACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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