The detailed information of tRNA gene sequence


Sequence ID>WENV170019960
Genome IDBBPE01001865
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2973
End posion on genome 2887
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaacaggccc
tRNA gene sequence 
GGAGGGGTGACCGAGTGGCTTAAGGTGCCGCTCTCGAAAAGCGGTGTCATCTCTGGTGAC
CGTGGGTTCGAATCCCACCCCCTCCGCtt
Downstream region at tRNA end position 
tcgagcggct
Secondary structure (Cloverleaf model)
>WENV170019960	Ser	CGA
                   c      GCtt tcgagcggct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G         | | |                 T T
    C       A G G T
      T T A        G     TGTCATCTCTGGTGACC
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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