The detailed information of tRNA gene sequence


Sequence ID>WENV170019983
Genome IDBBPE01002114
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2779
End posion on genome 2855
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttttttatT
tRNA gene sequence 
GGCGGAATAGTTTAGCTGGTCCAGAACGTTAGTTTCATAAACTAAATATCGAAAGTTCGA
ATCTTTCTTCCGTTAAta
Downstream region at tRNA end position 
aaaaataata
Secondary structure (Cloverleaf model)
>WENV170019983	Met	CAT
                   T      AAta aaaaataata
                     G + T
                     G + T
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T T T C     A
    T C G A        A      | | | | |     G
  G         T T T G       G A A A G     C
  G         + | | |                 T T
  T         G A A C
    C C A          G     ATATC
                    T - A
                    T - A
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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