The detailed information of tRNA gene sequence


Sequence ID>WENV170020008
Genome IDBBPE01002137
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 191698
End posion on genome 191607
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtgacaattt
tRNA gene sequence 
GGAGGCGTGGTAGAGTCTGGCTTATTACACCTGTCTCGAAAACAGGAACTGGGGAGACCT
GGTCGCGAGTTCGAATCTCGCCGCTTCCGCCA
Downstream region at tRNA end position 
aaattctgaa
Secondary structure (Cloverleaf model)
>WENV170020008	Ser	CGA
                   t      GCCA aaattctgaa
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     C G C T C     A
    C T G A        G      | | | | |     G
  T         G A T G       G C G A G     C
  G         + | | |                 T T
  G         T T A C
    C T T A        A     AACTGGGGAGACCTGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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