The detailed information of tRNA gene sequence


Sequence ID>WENV170020011
Genome IDBBPE01002137
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 165823
End posion on genome 165738
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
agtaaacgat
tRNA gene sequence 
TGAGGGTGGGCTGGATGGTTTAGGCGCCGGACTGTTAATCCGTGGAGGAAACTCCAAAGT
GGGTTCGATTCCCACACCCTCAGCCA
Downstream region at tRNA end position 
attgttataa
Secondary structure (Cloverleaf model)
>WENV170020011	Asn	GTT
                   t      GCCA attgttataa
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T T
                    G     C A C C C     A
      T A G        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         + | |                 T T
    T       A G G C
      T T          G     GGAGGAAACTCCAAA
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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