The detailed information of tRNA gene sequence


Sequence ID>WENV170020025
Genome IDBBPE01002154
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 933
End posion on genome 858
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ggctggctcc
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGGAGAGCGCGTCGTTCGCAATGACGAGGTCAGGGGTTCGATT
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
gcccaggagg
Secondary structure (Cloverleaf model)
>WENV170020025	Ala	CGC
                   c      ACCA gcccaggagg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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