The detailed information of tRNA gene sequence


Sequence ID>WENV170020035
Genome IDBBPE01002233
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 798
End posion on genome 893
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
acaggtttgC
tRNA gene sequence 
GGAGGGGAAACGACCCTGGTGGGTCGGCCGGGCTTCAAACCCGGTGGGTGGCGCCATGCG
TCGCCGGGTGGGTTCGACTCCCATTCCCCTCCGCC
Downstream region at tRNA end position 
gtcgcgcccc
Secondary structure (Cloverleaf model)
>WENV170020035	SeC	TCA
                   C      CGCC gtcgcgcccc
                     G - C
                     G + T
                     A   C
                     G - C
                     G - C
                     G - C
                     G + T          T C
                    A     T A C C C     A
      C C C        A      + | | | |     G
    T       A G C A       G T G G G     C
    G         +                     T T
    G       G T C G
      T G G        G     TGGGTGGCGCCATGCGTCGCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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