The detailed information of tRNA gene sequence


Sequence ID>WENV170020080
Genome IDBBPE01002786
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 340
End posion on genome 249
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccttaccccT
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGAATGCACCTGACTCGAAATCAGGAGTGGCGGTAACGTCA
TCGGGAGTTCGAATCTCCCCCTCTCCGTCC
Downstream region at tRNA end position 
Aaaattcgca
Secondary structure (Cloverleaf model)
>WENV170020080	Ser	CGA
                   T      GTCC Aaaattcgca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     AGTGGCGGTAACGTCATC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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