The detailed information of tRNA gene sequence


Sequence ID>WENV170020085
Genome IDBBPE01002810
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2170
End posion on genome 2086
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atcgttgcgg
tRNA gene sequence 
GGAGGAGTCGGATAACTGGCTATTCCGCCGGTCTCGAAAACTGGTGCTTGTAAAGGCTTG
TGGGTTCGAGTCCCACCTCCTCCGCac
Downstream region at tRNA end position 
gaaaaaatat
Secondary structure (Cloverleaf model)
>WENV170020085	Ser	CGA
                   g      GCac gaaaaaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C A C C C     A
      C A A        C      | | | | |     G
    T       T A G G       G T G G G     C
    G         | | |                 T T
    G       T T C C
      C T A        G     TGCTTGTAAAGGCTT
                    C - G
                    C - G
                    G + T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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