The detailed information of tRNA gene sequence


Sequence ID>WENV170020094
Genome IDBBPE01002888
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3237
End posion on genome 3328
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcttcgacgc
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCACCGGATTCGAAATCCGGCGTACAGTTTTTGCTG
TACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gttcaagtcc
Secondary structure (Cloverleaf model)
>WENV170020094	Ser	CGA
                   c      GCCA gttcaagtcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        A     CGTACAGTTTTTGCTGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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