The detailed information of tRNA gene sequence


Sequence ID>WENV170020098
Genome IDBBPE01002898
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 10087
End posion on genome 10011
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnncttagt
tRNA gene sequence 
CGGAGCGTAGCGCAGCCTGGTAGCGCATCTGCTTTGGGAGCAGAGGGTCGCGAGTTCGAA
TCCCGCCGCTCCGACCA
Downstream region at tRNA end position 
ttactacaaa
Secondary structure (Cloverleaf model)
>WENV170020098	Pro	TGG
                   t      ACCA ttactacaaa
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | |   |     G
    C       C G C G       G C G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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