The detailed information of tRNA gene sequence


Sequence ID>WENV170020105
Genome IDBBPE01002917
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 16834
End posion on genome 16911
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagtggatac
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCGA
ATCCTGTCCCCGCTACCA
Downstream region at tRNA end position 
aattattttt
Secondary structure (Cloverleaf model)
>WENV170020105	Met	CAT
                   c      ACCA aattattttt
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
    C T G A        G      + | | | |     G
  T         C G A G       G C A G G     C
  G         | | | |                 T T
  G         G C T C
    T T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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