The detailed information of tRNA gene sequence


Sequence ID>WENV170020106
Genome IDBBPE01002921
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 6341
End posion on genome 6417
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgccttcgtt
tRNA gene sequence 
GGTGATATAGCTCAGTTGGTTAGAGCGCAGCATTCATAATGCTGATGTCGGTGGTTCAAG
TCCACCTATCACCACCA
Downstream region at tRNA end position 
gttttaagca
Secondary structure (Cloverleaf model)
>WENV170020106	Met	CAT
                   t      ACCA gttttaagca
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C C A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     ATGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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