The detailed information of tRNA gene sequence


Sequence ID>WENV170020129
Genome IDBBPE01003229
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 58
End posion on genome 134
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tcactcgcgt
tRNA gene sequence 
CGGAGCGTAGCGCAGCCTGGTAGCGCATCAGTCTGGGGGACTGGGGGTCGTGGGTTCGAA
TCCCGCCGCTCCGACCA
Downstream region at tRNA end position 
ttttttcatg
Secondary structure (Cloverleaf model)
>WENV170020129	Pro	GGG
                   t      ACCA ttttttcatg
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     G
    C       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T + G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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