The detailed information of tRNA gene sequence


Sequence ID>WENV170020138
Genome IDBBPE01003298
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 469
End posion on genome 383
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
ggttcgccgc
tRNA gene sequence 
GGAGGGGTGCCCGAGTGGCTAAAGGGGGCAGACTGTAAATCTGTTGGCTTTGCGCCTACG
CTGGTTCGAATCCAGCCTCCTCCACCA
Downstream region at tRNA end position 
acggcgagcg
Secondary structure (Cloverleaf model)
>WENV170020138	Tyr	GTA
                   c      ACCA acggcgagcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C C       G C T G G     C
    G         | | |                 T T
    C       A G G G
      T A A        G     TGGCTTTGCGCCTAC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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