The detailed information of tRNA gene sequence


Sequence ID>WENV170020159
Genome IDBBPE01003525
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 13485
End posion on genome 13389
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gactgacagc
tRNA gene sequence 
GGGAGTAGATAGGTTCTGGTGTGCCTTCCGGACTTCAAATCCGTCAGCGGTCTCTAGAAC
AGGCCGCGGTGGGTTCGATTCCCACATGCTCCCGCCA
Downstream region at tRNA end position 
actaagcatc
Secondary structure (Cloverleaf model)
>WENV170020159	SeC(p)	TCA
                   c      GCCA actaagcatc
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     A - T
                     G   A          T T
                    A     C A C C C     A
      T C T        T      | | | | |     G
    G       T G G A       G T G G G     C
    G       + | | |                 T T
    T       G C C T
      G T          T     CAGCGGTCTCTAGAACAGGCCGCG
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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