The detailed information of tRNA gene sequence


Sequence ID>WENV170020167
Genome IDBBPE01003600
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 29981
End posion on genome 29889
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccgagtgct
tRNA gene sequence 
GGAGACGTGACCGAGTGGCCGAAGGTGCTCCCCTGCTAAGGGAGTATGCGGGCAAAACCT
GCATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gcacccccga
Secondary structure (Cloverleaf model)
>WENV170020167	Ser	GCT
                   t      GCCA gcacccccga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TATGCGGGCAAAACCTGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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