The detailed information of tRNA gene sequence


Sequence ID>WENV170020172
Genome IDBBPE01003628
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 548
End posion on genome 622
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gggtgcatgc
tRNA gene sequence 
GCCGAGTTAGCTTAGTGGTAGAGCAACCGCCTTGTAAGCGGTAGGTCAGTGGTTCGAGTC
CACTACTCGGCACCA
Downstream region at tRNA end position 
ttaactgctg
Secondary structure (Cloverleaf model)
>WENV170020172	Thr	TGT
                   c      ACCA ttaactgctg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     T - A          T G
                    T     T C A C C     A
        G A        A      | | | | |     G
      T     T T C G       A G T G G     C
      G     + | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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