The detailed information of tRNA gene sequence


Sequence ID>WENV170020176
Genome IDBBPE01003752
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3189
End posion on genome 3265
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tcacccgcgt
tRNA gene sequence 
CGGAGCGTAGCGCAGCCTGGTAGCGCATCAGTCTGGGGGACTGGGGGTCGTGGGTTCGAA
TCCCGCCGCTCCGACCA
Downstream region at tRNA end position 
tctttccgcc
Secondary structure (Cloverleaf model)
>WENV170020176	Pro	GGG
                   t      ACCA tctttccgcc
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | + | | |     G
    C       C G C G       G T G G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T + G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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