The detailed information of tRNA gene sequence


Sequence ID>WENV170020191
Genome IDBBPE01003918
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 18536
End posion on genome 18609
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gatttatagc
tRNA gene sequence 
GTCCCCATCGTCTAGAGGACTAGGACAAGGGCCTTTCGAGCCCTCGGCGGGGGTTCGAAT
CCCCCTGGGGACACtc
Downstream region at tRNA end position 
gtttttttta
Secondary structure (Cloverleaf model)
>WENV170020191	Glu	TTC
                   c      ACtc gtttttttta
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       G G G G G     C
    G       + | | |                 T T
    A       G G A C
      C T A        A     CGGC
                    A - T
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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