The detailed information of tRNA gene sequence


Sequence ID>WENV170020194
Genome IDBBPE01003941
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 60452
End posion on genome 60368
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccgccttcg
tRNA gene sequence 
GTCGAGGTCGCCTAGTCTGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCTTTGGGACTC
GAGGGTTCAAATCCCTCCCTCGGCGtcg
Downstream region at tRNA end position 
caatgcaata
Secondary structure (Cloverleaf model)
>WENV170020194	Ser	GCT
                   g      Gtcg caatgcaata
                     G - C
                     T + G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     A
    C       T C C G       G A G G G     C
    T         | | |                 T T
    G       T G G C
      G T A        G     TGTCCCTTTGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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