The detailed information of tRNA gene sequence


Sequence ID>WENV170020195
Genome IDBBPE01003941
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 59978
End posion on genome 59902
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaagttaagg
tRNA gene sequence 
GGGTCCGTGGTCTAGTTGGTTATGACGTCGCCCTCACATGGCGGAGGTCGCCGGTTCGAA
TCCGGCCGGGCCCATCA
Downstream region at tRNA end position 
aaaagaatta
Secondary structure (Cloverleaf model)
>WENV170020195	Val	CAC
                   g      ATCA aaaagaatta
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     C G G C C     A
      T G A        G      | | | | |     G
    T       T C T G       G C C G G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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