The detailed information of tRNA gene sequence


Sequence ID>WENV170020200
Genome IDBBPE01003984
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 7807
End posion on genome 7883
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataatactga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCAGGAAGCTCGTTGGGCTCATAACCCAAAGGTCGGCGGTTCAAA
TCCGTCCCCCGCTACCA
Downstream region at tRNA end position 
taaaaagagt
Secondary structure (Cloverleaf model)
>WENV170020200	Met	CAT
                   a      ACCA taaaaagagt
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T G C C     A
      T G A        G      | + | | |     A
    C       C G A G       G G C G G     C
    A       | | | |                 T T
    G       G C T C
      G A A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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