The detailed information of tRNA gene sequence


Sequence ID>WENV170020206
Genome IDBBPE01004064
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 15226
End posion on genome 15140
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttagatatat
tRNA gene sequence 
GCCGGGATGGCAGAGCGGACTAACGCGGCAGGCTCGAGACCTGTTGTCTCATTCGAGACA
CTTGGGTTCAAATCCCAATCCCGGCGCtc
Downstream region at tRNA end position 
acttcgtctg
Secondary structure (Cloverleaf model)
>WENV170020206	Ser	CGA
                   t      GCtc acttcgtctg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     A A C C C     A
      C G A        G      | | | | |     A
    G       G A C G       T T G G G     C
    G           | |                 T T
    A       A C G C
      C T A        G     TGTCTCATTCGAGACAC
                    G + T
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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