The detailed information of tRNA gene sequence


Sequence ID>WENV170020211
Genome IDBBPE01004209
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3949
End posion on genome 3864
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tctactcggt
tRNA gene sequence 
GCCGGGGTGGCGGAATGGCAGACGCGACGGACTTAAAATCCGTTGAACCTCAAGGTTCGT
GCGGGTTCGAGTCCCGCCCCCGGCACtg
Downstream region at tRNA end position 
ttgcctcgat
Secondary structure (Cloverleaf model)
>WENV170020211	Leu	TAA
                   t      ACtg ttgcctcgat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    G       G G C G       G C G G G     C
    G         | | |                 T T
    C       A C G C
      A G          G     TGAACCTCAAGGTTCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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