The detailed information of tRNA gene sequence


Sequence ID>WENV170020218
Genome IDBBPE01004333
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 7186
End posion on genome 7261
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gccgaagaca
tRNA gene sequence 
GGGCCGTTAGCTCAACTGGTAGAGCAACTGACTCTTAATCAGTAGGTTTGGGGTTCGAGC
CCCCGACGGCCCACCA
Downstream region at tRNA end position 
gtaacgccaa
Secondary structure (Cloverleaf model)
>WENV170020218	Lys	CTT
                   a      ACCA gtaacgccaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          C G
                    T     G C C C C     A
      C A A        A      + | | | |     G
    T       C T C G       T G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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