The detailed information of tRNA gene sequence


Sequence ID>WENV170020221
Genome IDBBPE01004350
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 588
End posion on genome 512
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ccttaaaaaa
tRNA gene sequence 
GGGGCTGTAGCTCAGTGAGGGAGAGCAACAGGCTGGCAGTCTGTGGGTCAGGGGTTCGAA
TCCCCTCAGCTCCACCA
Downstream region at tRNA end position 
agaaaatagg
Secondary structure (Cloverleaf model)
>WENV170020221	Ala	GGC
                   a      ACCA agaaaatagg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    G       C T C G       A G G G G     C
    A       | | | |                 T T
    G       G A G C
      G G A        A     GGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    G + T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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