The detailed information of tRNA gene sequence


Sequence ID>WENV170020227
Genome IDBBPE01004486
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 79
End posion on genome 4
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacaaatttt
tRNA gene sequence 
GCCGGCGTAGCTCAGCGGTAGTAGCAGGGTCTTCATAAGGCCAAGGTCACAGGTTCGAAT
CCTGTCGTCGGCACCA
Downstream region at tRNA end position 
agcnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170020227	Met	CAT
                   t      ACCA agcnnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        A      | | | | |     G
    G       C T C G       A C A G G     C
    G         | | |                 T T
    T       T A G C
      A G          A     AGGTC
                    G   A
                    G - C
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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