The detailed information of tRNA gene sequence


Sequence ID>WENV170020232
Genome IDBBPE01004579
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 895
End posion on genome 821
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gccgaaaggt
tRNA gene sequence 
GGGGTGGTAGCTCAATGGTAGAGCGCCGGTTTGTCAGTCGGGATGTCGTGGGTTCGATCC
CCACCCACTCCACCA
Downstream region at tRNA end position 
ccttgtccta
Secondary structure (Cloverleaf model)
>WENV170020232	Asp	GTC
                   t      ACCA ccttgtccta
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G - C          C T
                    T     C A C C C     A
        A A        A      | | | | |     G
      T     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGTC
                    C - G
                    C - G
                    G   G
                    G - C
                    T   T
                  T       G
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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