The detailed information of tRNA gene sequence


Sequence ID>WENV170020240
Genome IDBBPE01004709
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 4909
End posion on genome 4825
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gctttccttt
tRNA gene sequence 
GGGCAGGTGGTGGAATTGGCAGACACGTTAGTTTTAGGAGCTAATGCCGCAAGGTGTGTG
GGTTCGAGTCCCACCCTGCCCACTA
Downstream region at tRNA end position 
atgatatttc
Secondary structure (Cloverleaf model)
>WENV170020240	Leu	TAG
                   t      ACTA atgatatttc
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       G G T G       G T G G G     C
    G         | | |                 T T
    G       A C A C
      C A G        G     TGCCGCAAGGTGT
                    T - A
                    T - A
                    A - T
                    G - C
                    T + G
                  T       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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