The detailed information of tRNA gene sequence


Sequence ID>WENV170020241
Genome IDBBPE01004709
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 225
End posion on genome 151
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tttttcgtcc
tRNA gene sequence 
GGCCCCATCGTCTAACGGTTAGGACACCAGGTTTTCAACCTGGCAATCGGGGTTCGATTC
CCCGTGGGGTCACCA
Downstream region at tRNA end position 
aattagaaat
Secondary structure (Cloverleaf model)
>WENV170020241	Glu	TTC
                   c      ACCA aattagaaat
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     G C C C C     A
      C A A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAAT
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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