The detailed information of tRNA gene sequence


Sequence ID>WENV170020251
Genome IDBBPE01004864
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5294
End posion on genome 5218
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atatttatat
tRNA gene sequence 
TGCGGCGTAGGGGAGAGGCCGTCCCCACAAGGCTCATAACCTTTGAGATCATCAGTTCGA
ATCTGATCGCCGCGCCAc
Downstream region at tRNA end position 
aaaaaacacg
Secondary structure (Cloverleaf model)
>WENV170020251	Met	CAT
                   t      CCAc aaaaaacacg
                     T + G
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T A G T C     A
      A G A        A      | | | | |     G
    G       G G G G       A T C A G     C
    G       | | | |                 T T
    C       C C C C
      C G T        A     GAGATC
                    C   T
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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