The detailed information of tRNA gene sequence


Sequence ID>WENV170020279
Genome IDBBPE01005295
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2699
End posion on genome 2623
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tgtcggtttt
tRNA gene sequence 
CGGGATGTAGCGCAGCCTGGTAGCGCACTTGAATGGGGTTCAAGGGGCCGGAGGTTCGAA
TCCTCTCATCCCGACCA
Downstream region at tRNA end position 
gtagcatagc
Secondary structure (Cloverleaf model)
>WENV170020279	Pro	GGG
                   t      ACCA gtagcatagc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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