The detailed information of tRNA gene sequence


Sequence ID>WENV170020286
Genome IDBBPE01005378
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 933
End posion on genome 848
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cccctccgct
tRNA gene sequence 
GCCCAGATGGCGGAATGGTAGACGCGCAGGTTTCAGGTACCTGTGGCCGAAAGGCTGTGG
AGGTTCGAGTCCTCTTCTGGGCACCA
Downstream region at tRNA end position 
cttccccccg
Secondary structure (Cloverleaf model)
>WENV170020286	Leu	CAG
                   t      ACCA cttccccccg
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    G       G G C G       G G A G G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TGGCCGAAAGGCTGT
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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