The detailed information of tRNA gene sequence


Sequence ID>WENV170020296
Genome IDBBPE01005416
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 43688
End posion on genome 43758
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnnnnactac
tRNA gene sequence 
GGGTAATTAACTTAATGGTAGAGTGGCTCGCTTACATCGAGTAAATGGTGGTTCAATTCC
GCCATTACCCAttt
Downstream region at tRNA end position 
tgattattag
Secondary structure (Cloverleaf model)
>WENV170020296	Val	TAC
                   c      Attt tgattattag
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     A - T
                     T - A          T T
                    T     C C G C C     A
        A A        A      | | + | |     A
      T     T T C A       G G T G G     C
      G     + | | |                 T T
      G     G A G T
        T A        G     AAAT
                    G + T
                    C - G
                    T - A
                    C - G
                    G - C
                  C       T
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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