The detailed information of tRNA gene sequence


Sequence ID>WENV170020306
Genome IDBBPE01005576
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 9027
End posion on genome 9113
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
actttcctag
tRNA gene sequence 
CGGCCAGTGGTGAAATAGGTATACACAGCAGACTTAAAATCTGCCGACAGAAATGTCTTG
CGAGTTCAAGTCTCGCTTGGCCGACCA
Downstream region at tRNA end position 
aaagtacaac
Secondary structure (Cloverleaf model)
>WENV170020306	Leu	TAA
                   g      ACCA aaagtacaac
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G + T          T G
                    T     C G C T C     A
      T A A        G      | | | | |     A
    A       A G T G       G C G A G     C
    G         | | |                 T T
    G       A C A C
      T A T        A     CGACAGAAATGTCTT
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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