The detailed information of tRNA gene sequence


Sequence ID>WENV170020326
Genome IDBBPE01005795
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5036
End posion on genome 4961
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacaagtttT
tRNA gene sequence 
GCCGACGTAGCTCAGTGGTTAGTAGCAGGGTCTTCATAAGGCCAAGGTCACAGGTTCGAA
TCCTGTCGTCGGCATaa
Downstream region at tRNA end position 
aattttgaaa
Secondary structure (Cloverleaf model)
>WENV170020326	Met	CAT
                   T      ATaa aattttgaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     G
    G       C T C G       A C A G G     C
    G         | | |                 T T
    T       T A G C
      T A G        A     AGGTC
                    G   A
                    G - C
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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