The detailed information of tRNA gene sequence


Sequence ID>WENV170020337
Genome IDBBPE01006053
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 5225
End posion on genome 5301
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agagattcat
tRNA gene sequence 
GGGCGCGTAGCTCAGTTGGTTAGAGCGTTACGTTCACATCGTAAAGGCCAATGGTTCGAG
TCCATTCGTGCCCACCA
Downstream region at tRNA end position 
taatgaattt
Secondary structure (Cloverleaf model)
>WENV170020337	Val	CAC
                   t      ACCA taatgaattt
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C          T G
                    T     T T A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGCC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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