The detailed information of tRNA gene sequence


Sequence ID>WENV170020338
Genome IDBBPE01006118
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2287
End posion on genome 2378
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
ccgtgcccgt
tRNA gene sequence 
GGGCGCGTAGGTTAACGGTAGACCAGCGGCCTTATACTCCGTTCGCTCCAGATGGGAGCA
AAGTCCGGGTTCGAATCCCGGCGCGCCTACCA
Downstream region at tRNA end position 
aacgcgacac
Secondary structure (Cloverleaf model)
>WENV170020338	Ile	TAT
                   t      ACCA aacgcgacac
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     G G C C C     A
        A A        A      | | | | |     G
      C     T T G G       C C G G G     C
      G     + | | |                 T T
      G     G A C C
        T A        A     TCGCTCCAGATGGGAGCAAAGT
                    G + T
                    C - G
                    G - C
                    G - C
                    C   T
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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