The detailed information of tRNA gene sequence


Sequence ID>WENV170020351
Genome IDBBPE01006290
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 403
End posion on genome 492
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aatgagcccc
tRNA gene sequence 
GGAAGGGTGGCCGAGCGGTCTAAGGCACCTGATTCGAAATCAGACGTGGGTTCGCGCCCA
CCGTGGGTTCGAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
gttccggaca
Secondary structure (Cloverleaf model)
>WENV170020351	Ser	CGA
                   c      GCCA gttccggaca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        A     CGTGGGTTCGCGCCCACC
                    C   A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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