The detailed information of tRNA gene sequence


Sequence ID>WENV170020360
Genome IDBBPE01006412
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 2811
End posion on genome 2740
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
taaataatac
tRNA gene sequence 
GGCCCCATCGTCTAGTGGTTAGGACTCCAGATTTTCAATCTGGCAACCGGAGTTCGACTC
TCCGTGGGGTCAttt
Downstream region at tRNA end position 
tatnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170020360	Glu	TTC
                   c      Attt tatnnnnnnn
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T C
                    T     G C C T C     A
      T G A        C      | | | | |     G
    G       T C T G       C G G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          T     CAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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