The detailed information of tRNA gene sequence


Sequence ID>WENV170020373
Genome IDBBPE01006618
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 3496
End posion on genome 3581
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aattattttT
tRNA gene sequence 
GGAGGGTTGGCAGAATGGCAATGCGCTGGTTTTGAAAACCAGTGGGCGTAAGCCCTTGCA
GGTTCGAGTCCTGCACCCTCCGCCC
Downstream region at tRNA end position 
cgcagtgaaa
Secondary structure (Cloverleaf model)
>WENV170020373	Ser	TGA
                   T      GCCC cgcagtgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T G
                    T     C G T C C     A
        A A        G      | | | | |     G
      T     G A C G       G C A G G     C
      G       | | |                 T T
      G     A T G C
        C A        G     TGGGCGTAAGCCCTT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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