The detailed information of tRNA gene sequence


Sequence ID>WENV170020387
Genome IDBBPE01006883
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 231
End posion on genome 145
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aaaaaacgac
tRNA gene sequence 
GCCGAAGTGGTGGAACTGGCAGACGCGCTGCGTTCAGGGCGCAGTGAGTGTAAGCTCATG
TGGGTTCAAATCCCACCTTCGGCACCA
Downstream region at tRNA end position 
aagtaaatgt
Secondary structure (Cloverleaf model)
>WENV170020387	Leu	CAG
                   c      ACCA aagtaaatgt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C A C C C     A
      C A A        G      | | | | |     A
    T       G G T G       G T G G G     C
    G         | + |                 T T
    G       A C G C
      C A G        G     TGAGTGTAAGCTCAT
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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