The detailed information of tRNA gene sequence


Sequence ID>WENV170020389
Genome IDBBPE01006887
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 11625
End posion on genome 11553
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtagacttag
tRNA gene sequence 
GGGGCGTTGGCCGAGCGGTTCAGGCAGCAAACTCATAATTTGCCCTACACAGGTTCGAAC
CCTGTACGCCCCAtgc
Downstream region at tRNA end position 
ttaagtattt
Secondary structure (Cloverleaf model)
>WENV170020389	Met	CAT
                   g      Atgc ttaagtattt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          C A
                    T     T G T C C     A
      C G A        G      | | | | |     G
    G       G C C G       A C A G G     C
    G         | | |                 T T
    T       A G G C
      T C          A     CCTAC
                    G - C
                    C - G
                    A - T
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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