The detailed information of tRNA gene sequence


Sequence ID>WENV170020393
Genome IDBBPE01006924
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 200
End posion on genome 126
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aaactaaaat
tRNA gene sequence 
GCCCTCGTAGTTCAACGGACAGAATAGGACTCTTCTAAAGTCTAGATCGAGGTTCGATTC
CTCGCGAGGGCACCA
Downstream region at tRNA end position 
tggtggtcgt
Secondary structure (Cloverleaf model)
>WENV170020393	Arg	TCT
                   t      ACCA tggtggtcgt
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     G C T C C     A
      C A A        A      | | | | |     G
    G       C T T G       C G A G G     C
    G       | | | +                 T T
    A       G A A T
      C A          A     AGAT
                    G + T
                    G - C
                    A - T
                    C - G
                    T - A
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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