The detailed information of tRNA gene sequence


Sequence ID>WENV170020406
Genome IDBBPE01007063
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 93
End posion on genome 4
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagaaaaaat
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGCCGAATGGGACACGGTGCTAACGTGTTGTCTCGGAAACGGGA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gttnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170020406	Ser	GCT
                   t      GCCA gttnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    C       A T G G
      C G A        G     TGTCTCGGAAACGGGACC
                    A - T
                    C - G
                    A - T
                    C - G
                    G - C
                  G       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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