The detailed information of tRNA gene sequence


Sequence ID>WENV170020441
Genome IDBBPE01007912
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 173
End posion on genome 100
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aaataatcat
tRNA gene sequence 
CGGGCTGTAGTATACCGGTAGTACGCACCCTTCGGGAGGGTGTAGACTGGGTTCGATTCC
CAGCAGCCCGACCA
Downstream region at tRNA end position 
atcaagacat
Secondary structure (Cloverleaf model)
>WENV170020441	Pro	CGG
                   t      ACCA atcaagacat
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     G A C C C     A
        C A        A      | | | | |     G
      C     T A T G       C T G G G     C
      G     + | | |                 T T
      G     G T A C
        T A        G     TAGA
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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