The detailed information of tRNA gene sequence


Sequence ID>WENV170020465
Genome IDBBPE01008541
Search identical group
Phylum/Class[BBPE] groundwater metagenome; The Cedars highly-alkaline serpentinizing springs in California
Species
Start position on genome 460
End posion on genome 534
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
agtttctaaa
tRNA gene sequence 
CGGAGCGTAGTATAACGGTTATTATCTCGGGCTGGGGGTCCGAGGAACTGGGTTCAACTC
CCAGCGCTCCGACCA
Downstream region at tRNA end position 
accgtaattt
Secondary structure (Cloverleaf model)
>WENV170020465	Pro	GGG
                   a      ACCA accgtaattt
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T C
                    T     G A C C C     A
      C A A        A      | | | | |     A
    G       T A T G       C T G G G     C
    G         | | +                 T T
    T       T T A T
      T A          C     GGAA
                    T - A
                    C - G
                    G - C
                    G - C
                    G + T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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